Tuesday, April 21, 2015

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Mary-Claire King, a geneticist whose work led to the discovery of a gene that carries an added risk for breast cancer, has called for testing to be offered to all American women 30 and older. CreditKyle Johnson for The New York Times
A Silicon Valley start-up with some big-name backers is threatening to upend genetic screening for breast andovarian cancer by offering a test on a sample of saliva that is so inexpensive that most women could get it.
At the same time, the nation’s two largest clinical laboratories, Quest Diagnostics and LabCorp, normally bitter rivals, are joining with French researchers to pool their data to better interpret mutations in the two mainbreast cancer risk genes, known as BRCA1 and BRCA2. Other companies and laboratories are being invited to join the effort, called BRCA Share.
The announcements being made on Tuesday, although coincidental in their timing, speak to the surge in competition in genetic risk screening for cancer since 2013, when the Supreme Court invalidated the gene patents that gave Myriad Genetics a monopoly on BRCA testing.
The field has also been propelled by the actress and filmmaker Angelina Jolie, who has a BRCA1 mutation andhas written about her own decision to have her breasts, ovaries and fallopian tubes removed to sharply reduce her risk of developing cancer.
But the issue of who should be tested remains controversial. The effort of the start-up, Color Genomics, to “democratize access to genetic testing,” in the words of the chief executive, Elad Gil, is generating concern among some experts.
The company plans to charge $249 for an analysis of BRCA1 and BRCA2, plus 17 other cancer-risk genes. That is one tenth the price of many tests now on the market.
Testing of the BRCA genes has generally been limited by medical guidelines to women who already have cancer or those with a family history of breast or ovarian cancers. Insurers generally have not paid for BRCA tests for other women, and some insurers are not paying at all for a newer type of screening known as a panel test that analyzes from 10 to 40 genes at once.
Dr. Gil of Color said his company’s test would be inexpensive enough for women to pay out of pocket, so that neither the woman nor Color will have to deal with insurance companies. He said the company was starting a program to provide free testing to women who cannot afford its test.
One of the company’s unpaid advisers is Mary-Claire King, the University of Washington geneticist whose work led to the discovery of the BRCA1 gene. Dr. King last year publicly called for testing to be offered to all American women 30 and older.
She said that half the women with dangerous mutations would not qualify for testing under current guidelines, in part because many inherit the mutation from their fathers rather than their mothers and a family history of breast or ovarian cancer might not be evident.
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Color Genomics plans to charge $249 for its test for breast cancer genes. Women collect a saliva sample, then have it tested. CreditJason Jurgens
But other experts say that fewer women in the expanded group would be found to have dangerous mutations, raising the overall cost of testing per cancer case prevented. Moreover, expanded testing could result in many more women being told they have mutations that cannot be classified as either dangerous or benign, leaving women in a state of limbo as to whether they have an increased risk of cancer.
“We have to be careful that we are not just increasing this group of worried-well who have incomplete information,” said Dr. Kenneth Offit, chief of the clinical genetics service at the Memorial Sloan Kettering Cancer Center.
Dr. Offit said it was contradictory that Color was trying to expand testing to everyone on the same day the two biggest testing companies were joining forces to try to reduce how often they find these so-called variants of uncertain significance.
Color is planning to allow women to order tests through its website. Another Silicon Valley start-up that did that, 23andMe, had its health testing shut down in 2013 by the Food and Drug Administration.
Color executives say that unlike with 23andMe, a doctor will be involved in every order and in the test results. If a consumer orders the test directly from its website, her information will be sent to a doctor hired by the company to evaluate it.
An F.D.A. spokeswoman said that if doctors place orders, testing companies that operate their own laboratories do not need F.D.A. approval to offer their tests.
Some testing experts question whether Color can provide testing as inexpensively as it claims. While the actual sequencing might be done for less than $250, that is only part of the cost, which also involves interpretation and working with patients and doctors, they say. Other companies generally charge at least $1,500 for complete analyses of the BRCA genes or for multigene tests.
But Dr. Gil said Color has highly automated its processes and will even offer genetic counseling to women. He said the company chose the saliva test rather than a blood one because it’s easier for users but still accurate. Women send the saliva sample to Color for testing.
Dr. Gil received a doctoral degree in biology at the Massachusetts Institute of Technology, studying a cancer gene. But he has spent much of his career at Google and Twitter. The company’s president, Othman Laraki, also worked at Google and Twitter.
Color’s backers — it says it has raised about $15 million — are mainly from the world of high tech rather than life sciences. Its lead investors are the venture capital firms Khosla Ventures and Formation 8. Individual investors include Laurene Powell Jobs, the widow of Steve Jobs; Susan L. Wagner, a co-founder of the investment firm BlackRock; Padmasree Warrior, the chief technology and strategy officer at Cisco; and Jerry Yang, co-founder of Yahoo.
Dr. Offit of Sloan Kettering said that even Myriad, which long had a monopoly on BRCA testing and has the most data, has reported having a 2 percent rate of variants of unknown significance, meaning 2 percent of the time it cannot tell if a variant in a gene increases the risk of cancer or is benign. Other companies might have higher rates. And the rates for some other, less-well-studied genes can be 20 or 30 percent, he said.
The entire testing industry is now scrambling to pool data to lower that rate, and in some cases to catch up to Myriad, which has kept much of its data proprietary as a competitive advantage. Various data-sharing efforts are already underway, including by ClinVar and the BRCA Challenge.
Now there is also BRCA Share, which is based on a database of genetic variants maintained by Inserm, a French government health research institute. Quest Diagnostics agreed to provide money to improve that database and pay for experiments on cells that could help determine whether certain mutations raise the risk of cancer.
“We are going to help them make it better,” said Dr. Charles M. Strom, vice president for genomics and genetics at Quest. He said BRCA Share would be open to others, with LabCorp becoming the first to join.
Participants will have to contribute their data to the database. Companies will pay for access to the data on a sliding scale based on their size, while others will have access to the data without paying, he said.
http://www.nytimes.com/2015/04/21/business/more-accurate-affordable-tests-for-detecting-breast-cancer-genes.html

Wednesday, April 8, 2015

What One Woman Learned After Caring For Her Husband Through Lung Cancer

Posted: Updated: 
LAURA POST
In 2005, Laura and her husband Tim opened a bakery in Ypsilanti, Michigan, fulfilling a lifelong goal of Tim's. In July 2012, Tim was diagnosed with stage IV lung cancer. He died in October 2013 at age 53. This is Laura and Tim's story.
How It Happened: In May 2012, my husband went out of town to a car show. It was inside a tent and when he came outside, his left eye was clouded over. He went to a regular eye doctor, who referred him to a specialist. I live in Ann Arbor and the Kellogg Eye Center here is pretty famous, so he went there. The doctor knew immediately what this was associated with and ordered a scan. It was the day before the Fourth of July. My husband had the scan and the day after, while I was at work, he went to review the results with his primary-care doctor. They called me immediately. You get really shellshocked -- that’s the first, sort of awful part. Then the road opens up and you have no idea what’s on that road.
Before the treatment could even start -- a week later, my kids called me at work. “Mom, something’s wrong. He’s in pain.” Compression fractures had occurred in his spine. He was rushed to the emergency room. Then it’s these sort of spiraling events. All these things start happening all at once. It’s tough, physically and emotionally. They don’t show you the scans, they tell you about them. I remember one of the oncology doctors, midway through radiation, actually pulled up the picture of his spine with tumors in it. It makes you want to faint.
You are trying to figure out the logistics of everything. The logistics are harder than anybody can really ever imagine. It’s not where everybody sits around and has a nice meal and listens to nice music. It’s not like that. It’s trying to help your husband keep food down and keep him comfortable. You are on-call every second of the day. As a caregiver, you get your adrenaline levels going and after a while they get completed depleted.
I grew up with a dad who was a cardiologist, and people died suddenly from heart attacks all the time. I knew that this could happen. Death happens. My husband had never thought about death. He really didn’t know how to process it. He just wasn’t that kind of person. He had no concept of what was going to lie ahead of him.
tim post
How I Coped: In February 2013, I remember walking out to my car, my brain just in turmoil. There was all this talk of divorce and crazy stuff. A friend of mine, who’s big into yoga, took a CD out of her car. She goes, “Take this.” The CD was by a yoga instructor she was friends with, and it was really him just talking the listener through closing her eyes and breathing. The minute I put that CD in my car, that’s what I did every day. I started with meditation. What you’re doing is letting go for a moment. You can’t control the situation, but you need to think clearly to understand how to navigate it. I grew up in the sixties in Kentucky. It’s a little traditional -- you don’t grow up with that whole thing about taking care of yourself. I had to read a lot of articles about how it was okay to take care of myself.
Where I Stand: People sit back and think, “I can’t believe somebody is going to not fight this thing.” Well, it’s the stupidest fight on the planet. Why spend your energy fighting something if you can end things with your family in a peaceful, loving way? I told people at work: If my husband had gotten diagnosed and died suddenly, I’d be sitting here, in the middle of 2013, crying because I had lost the love of my life. Here I was in the middle of 2013 praying. Really praying, that God, or nature, or the universe, would just take him. It’s really hard on the family.
I realized that if I were faced with my own diagnosis, if it were one like lung cancer, I would never go down that path. Not because I don’t believe in medicine, or society, or because I’m really negative. I just know that for me personally, it wouldn’t be worth it. I sat there in oncology -- I didn’t even sit in the waiting room, I sat near the radiation because I had to help my husband in and out of his room. I saw him in all kinds of situations and it was pretty eye-opening. I know personally, I would choose death.
What I Learned: I told Tim when he started his bakery, “Do this now, sweetheart.” It was a great move for him and I’m so glad we did it. I remember telling him, “Do this because you don’t know what your life will bring. You don’t know when you’re going to die or when something will happen to make you not be able to do this.”
Now that it’s over, the other half of it, I have to say, is that life never looked so beautiful. When I go on a walk, I am literally smiling. I thank God every day that I can walk. It changed my whole perspective on the beauty around me. That’s the good part that comes out of it.
My daughter convinced me to join the Y that’s not too far from our home. I walk down that street -- my husband and I had a couple of friends who lived on this street, way back before kids. I walk by those houses and I go, “That’s right. We used to have a great time.” That’s the piece that is remaining, luckily. Through the whole grieving process, I never thought that any of that good stuff would come back, but it did, in an even bigger way. It’s hard not to walk by those houses and start to laugh and smile and appreciate life.
As told to Erin Schumaker. This email and interview have been edited for length and clarity.
Do you have a story about cancer and emotional wellness you'd like to share? Email us at healthyliving@huffingtonpost.com to share your thoughts in your own words. Please be sure to include your name and phone number.

Friday, April 3, 2015

Mouth sores caused by cancer treatment: How to cope

Understand how to manage cancer treatment side effects, including mouth sores, so you can feel more in control as you go through cancer treatment.
By Mayo Clinic Staff
If you're about to begin cancer treatment, be aware that certain treatments can cause mouth sores (oral mucositis).
Mouth sores can be painful and distressing. They can range from a mere inconvenience to a severe complication that may make you unable to continue your cancer treatment.

What are cancer-related mouth sores?

Cancer-related mouth sores are sores or ulcers that form on the inside lining of your mouth or on your lips. The mouth sores appear burn-like and can be painful, making it difficult to eat, talk, swallow and breathe.
Sores can appear on any of the soft tissues of your lips or your mouth, including your gums, your tongue, or the roof and floor of your mouth. Sores can also extend into the tube (esophagus) that carries food to your stomach.

How do cancer treatments cause mouth sores?

Chemotherapy and radiation — alone or combined — can cause mouth sores. That's because these cancer treatments are intended to kill rapidly growing cells — such as cancer cells.
Some healthy cells in your body also divide and grow rapidly, including the cells that line the inside of your mouth. Unfortunately these healthy cells are also damaged by chemotherapy and radiation.
Damage to the cells in your mouth makes it difficult for your mouth to heal itself and to fend off germs, leading to sores and infections.
Chemotherapy and radiation both can impair your body's germ-fighting system (immune system). With an impaired immune system, viruses, bacteria and fungi can more easily infect your mouth, causing mouth sores or making mouth sores worse.
Bone marrow or stem cell transplants also can lead to mouth sores if you develop graft-versus-host disease (GVHD). In GVHD, the transplanted cells or stem cells try to reject your body's normal cells. The transplanted cells view your body's cells as foreign and attack them. Mouth sores are just one sign of GVHD.
Here's what you may experience with each type of cancer treatment.

Chemotherapy

Whether you experience mouth sores while undergoing chemotherapy depends on the type and dose of medication you receive, as well as how often you receive your treatment. The chemotherapy drugs most likely to cause mouth sores include:
  • Capecitabine (Xeloda)
  • Cisplatin (Platinol)
  • Cytarabine (Depocyt, Cytosar U)
  • Doxorubicin (Doxil)
  • Etoposide
  • Fluorouracil (Carac, Fluoroplex, Efudex)
  • Methotrexate (Rheumatrex, Trexall)
Mouth sores caused by chemotherapy treatment usually develop a few days after treatment begins and go away within two or three weeks after stopping chemotherapy. The mouth sores usually reach their peak around the seventh day after chemotherapy treatment ends.

Head or neck radiation therapy

Only radiation aimed at your head or neck causes mouth sores. Whether your radiation treatment will cause mouth sores depends on how much radiation you receive and whether you're also receiving chemotherapy at the same time.
You may begin to experience mouth pain two to three weeks after you begin radiation. More-intense doses of radiation will cause mouth sores to develop more quickly. Mouth sores from radiation may last four to six weeks after your last radiation treatment.

Bone marrow or stem cell transplant

Mouth sores associated with GVHD develop two to three weeks after a bone marrow or stem cell transplant.
People who receive transplants usually receive high-dose chemotherapy or radiation to prepare their bodies for the transplant. Since these therapies also cause mouth sores, it can be difficult to tell whether the sores are from the transplant preparation treatment or from GVHD.
Your doctor may test cells from your mouth to determine what's causing your mouth sores.